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Gigaxonin as a prognostic marker of human cancer: genomic visualizations
Gigaxonin as a prognostic marker of human cancer: genomic visualizations
Jul 13, 2021
Ali, Ibraheem; Yan, Weihong; Urbanowicz, Karolina K.; Morselli, Marco; Pellegrini, Matteo; Srivatsan, Eri S., 2021, "Gigaxonin as a prognostic marker of human cancer: genomic visualizations", https://doi.org/10.25346/S6/IMXOOK, UCLA Dataverse, V1
This data and code submission is associated with the publication "Gigaxonin as a prognostic marker of human cancer". The data includes copy number variation (CNV), insertion/deletion (Indel), and unique and/or overlapping single nucleotide polymorphism (SNP) data for several cond...
210701_rCircos_Params.Rmd
Jul 13, 2021 - Gigaxonin as a prognostic marker of human cancer: genomic visualizations
Unknown - 58.4 KB - MD5: cf8e823f1a0e20a9851b50b5ffa9ffd3
R markdown code file. This should be opened in R studio. This contains the code to reproduce the pdfs used to create the data visualizations.
AllNonSynonymousSNPs.pdf
AllNonSynonymousSNPs.pdf
Jul 13, 2021 - Gigaxonin as a prognostic marker of human cancer: genomic visualizations
Adobe PDF - 13.1 MB - MD5: 98609214b81cac625bdbe169e2e75dfd
Chr10VAFplot.pdf
Chr10VAFplot.pdf
Jul 13, 2021 - Gigaxonin as a prognostic marker of human cancer: genomic visualizations
Adobe PDF - 41.6 KB - MD5: 79ffec7f125c6af6a42737fea71f392a
Depicting all non-synonymous SNPs
Chr12VAFplot.pdf
Chr12VAFplot.pdf
Jul 13, 2021 - Gigaxonin as a prognostic marker of human cancer: genomic visualizations
Adobe PDF - 58.8 KB - MD5: cdd226ecb26d84403e47771fb49f0dc6
Depicting all non-synonymous SNPs
Chr14VAFplot.pdf
Chr14VAFplot.pdf
Jul 13, 2021 - Gigaxonin as a prognostic marker of human cancer: genomic visualizations
Adobe PDF - 38.3 KB - MD5: 98101d85275b0fd399c26f37400cbf11
Depicting all non-synonymous SNPs
Chr16VAFplot.pdf
Chr16VAFplot.pdf
Jul 13, 2021 - Gigaxonin as a prognostic marker of human cancer: genomic visualizations
Adobe PDF - 49.9 KB - MD5: 3adf2ecf43509807b321de2b6101738b
Depicting all non-synonymous SNPs
Chr1VAFplot.pdf
Chr1VAFplot.pdf
Jul 13, 2021 - Gigaxonin as a prognostic marker of human cancer: genomic visualizations
Adobe PDF - 94.4 KB - MD5: 86a39dd6f036a8094b01004fc1f1f2cf
Depicting all non-synonymous SNPs
Chr4VAFplot.pdf
Chr4VAFplot.pdf
Jul 13, 2021 - Gigaxonin as a prognostic marker of human cancer: genomic visualizations
Adobe PDF - 35.4 KB - MD5: 15919b5f946a78f86ba5b83c8754e6ba
Depicting all non-synonymous SNPs
Chr5VAFplot.pdf
Chr5VAFplot.pdf
Jul 13, 2021 - Gigaxonin as a prognostic marker of human cancer: genomic visualizations
Adobe PDF - 42.0 KB - MD5: acae99a7c1ae3530cf6a79adcdc99639
Depicting all non-synonymous SNPs
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